Updated on 2025/03/27

写真a

 
Shinnakasu Ryo
 
Organization
Institute for Research, Innovation and Collaboration (IRIC) Advanced Research Support Center (ADRES) Associate Professor
Title
Associate Professor
Contact information
メールアドレス
External link

Degree

  • 博士(医学) ( 千葉大学 )

Research Interests

  • 免疫学

  • Immunology

Research Areas

  • Life Science / Immunology

Research Subject

  • Research for the mechanism of humoral immune response in viral infections

Proposed Theme of Joint or Funded Research

  • Study for biological defense system from Microbial infection

Professional Memberships

Papers

  • CD62L expression marks SARS-CoV-2 memory B cell subset with preference for neutralizing epitopes

    Taishi Onodera, Nicolas Sax, Takashi Sato, Yu Adachi, Ryutaro Kotaki, Takeshi Inoue, Ryo Shinnakasu, Takayuki Nakagawa, Shuetsu Fukushi, Tommy Terooatea, Mai Yoshikawa, Keisuke Tonouchi, Takaki Nagakura, Saya Moriyama, Takayuki Matsumura, Masanori Isogawa, Kazutaka Terahara, Tomohiro Takano, Lin Sun, Ayae Nishiyama, Shinnya Omoto, Masaharu Shinkai, Tomohiro Kurosaki, Kazuo Yamashita, Yoshimasa Takahashi

    Science Advances   9 ( 24 )   2023.6

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    Publishing type:Research paper (scientific journal)   Publisher:American Association for the Advancement of Science (AAAS)  

    Severe acute respiratory syndrome coronavirus 2–neutralizing antibodies primarily target the spike receptor binding domain (RBD). However, B cell antigen receptors (BCRs) on RBD-binding memory B (B <sub>mem</sub> ) cells have variation in the neutralizing activities. Here, by combining single B <sub>mem</sub> cell profiling with antibody functional assessment, we dissected the phenotype of B <sub>mem</sub> cell harboring the potently neutralizing antibodies in coronavirus disease 2019 (COVID-19)–convalescent individuals. The neutralizing subset was marked by an elevated CD62L expression and characterized by distinct epitope preference and usage of convergent V <sub>H</sub> (variable region of immunoglobulin heavy chain) genes, accounting for the neutralizing activities. Concordantly, the correlation was observed between neutralizing antibody titers in blood and CD62L <sup>+</sup> subset, despite the equivalent RBD binding of CD62L <sup>+</sup> and CD62L <sup>−</sup> subset. Furthermore, the kinetics of CD62L <sup>+</sup> subset differed between the patients who recovered from different COVID-19 severities. Our B <sub>mem</sub> cell profiling reveals the unique phenotype of B <sub>mem</sub> cell subset that harbors potently neutralizing BCRs, advancing our understanding of humoral protection.

    DOI: 10.1126/sciadv.adf0661

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  • CD62L expression marks SARS-CoV-2 memory B cell subset with preference for neutralizing epitopes. International journal

    Taishi Onodera, Nicolas Sax, Takashi Sato, Yu Adachi, Ryutaro Kotaki, Takeshi Inoue, Ryo Shinnakasu, Takayuki Nakagawa, Shuetsu Fukushi, Tommy Terooatea, Mai Yoshikawa, Keisuke Tonouchi, Takaki Nagakura, Saya Moriyama, Takayuki Matsumura, Masanori Isogawa, Kazutaka Terahara, Tomohiro Takano, Lin Sun, Ayae Nishiyama, Shinnya Omoto, Masaharu Shinkai, Tomohiro Kurosaki, Kazuo Yamashita, Yoshimasa Takahashi

    Science advances   9 ( 24 )   eadf0661   2023.6

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    Language:English   Publishing type:Research paper (scientific journal)  

    Severe acute respiratory syndrome coronavirus 2-neutralizing antibodies primarily target the spike receptor binding domain (RBD). However, B cell antigen receptors (BCRs) on RBD-binding memory B (Bmem) cells have variation in the neutralizing activities. Here, by combining single Bmem cell profiling with antibody functional assessment, we dissected the phenotype of Bmem cell harboring the potently neutralizing antibodies in coronavirus disease 2019 (COVID-19)-convalescent individuals. The neutralizing subset was marked by an elevated CD62L expression and characterized by distinct epitope preference and usage of convergent VH (variable region of immunoglobulin heavy chain) genes, accounting for the neutralizing activities. Concordantly, the correlation was observed between neutralizing antibody titers in blood and CD62L+ subset, despite the equivalent RBD binding of CD62L+ and CD62L- subset. Furthermore, the kinetics of CD62L+ subset differed between the patients who recovered from different COVID-19 severities. Our Bmem cell profiling reveals the unique phenotype of Bmem cell subset that harbors potently neutralizing BCRs, advancing our understanding of humoral protection.

    DOI: 10.1126/sciadv.adf0661

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  • Antibody feedback contributes to facilitating the development of Omicron-reactive memory B cells in SARS-CoV-2 mRNA vaccinees

    Takeshi Inoue, Ryo Shinnakasu, Chie Kawai, Hiromi Yamamoto, Shuhei Sakakibara, Chikako Ono, Yumi Itoh, Tommy Terooatea, Kazuo Yamashita, Toru Okamoto, Noritaka Hashii, Akiko Ishii-Watabe, Noah S. Butler, Yoshiharu Matsuura, Hisatake Matsumoto, Shinya Otsuka, Kei Hiraoka, Takanori Teshima, Masaaki Murakami, Tomohiro Kurosaki

    Journal of Experimental Medicine   220 ( 2 )   2023.2

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    Publishing type:Research paper (scientific journal)   Publisher:Rockefeller University Press  

    In contrast to a second dose of the SARS-CoV-2 mRNA vaccine, a third dose elicits potent neutralizing activity against the Omicron variant. To address the underlying mechanism for this differential antibody response, we examined spike receptor-binding domain (RBD)–specific memory B cells in vaccinated individuals. Frequency of Omicron-reactive memory B cells increased ∼9 mo after the second vaccine dose. These memory B cells show an altered distribution of epitopes from pre-second memory B cells, presumably due to an antibody feedback mechanism. This hypothesis was tested using mouse models, showing that an addition or a depletion of RBD-induced serum antibodies results in a concomitant increase or decrease, respectively, of Omicron-reactive germinal center (GC) and memory B cells. Our data suggest that pre-generated antibodies modulate the selection of GC and subsequent memory B cells after the second vaccine dose, accumulating more Omicron-reactive memory B cells over time, which contributes to the generation of Omicron-neutralizing antibodies elicited by the third vaccine dose.

    DOI: 10.1084/jem.20221786

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  • Generation of High Quality Memory B Cells Reviewed

    Takeshi Inoue, Ryo Shinnakasu, Tomohiro Kurosaki

    Frontiers in Immunology   12   2022.1

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    Publishing type:Research paper (scientific journal)   Publisher:Frontiers Media SA  

    Protection against pathogen re-infection is mediated, in large part, by two humoral cellular compartments, namely, long-lived plasma cells and memory B cells. Recent data have reinforced the importance of memory B cells, particularly in response to re-infection of different viral subtypes or in response with viral escape mutants. In regard to memory B cell generation, considerable advancements have been made in recent years in elucidating its basic mechanism, which seems to well explain why the memory B cells pool can deal with variant viruses. Despite such progress, efforts to develop vaccines that induce broadly protective memory B cells to fight against rapidly mutating pathogens such as influenza virus and HIV have not yet been successful. Here, we discuss recent advances regarding the key signals and factors regulating germinal center-derived memory B cell development and activation and highlight the challenges for successful vaccine development.

    DOI: 10.3389/fimmu.2021.825813

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  • Identification of conserved SARS-CoV-2 spike epitopes that expand public cTfh clonotypes in mild COVID-19 patients. International journal

    Xiuyuan Lu, Yuki Hosono, Masamichi Nagae, Shigenari Ishizuka, Eri Ishikawa, Daisuke Motooka, Yuki Ozaki, Nicolas Sax, Yuichi Maeda, Yasuhiro Kato, Takayoshi Morita, Ryo Shinnakasu, Takeshi Inoue, Taishi Onodera, Takayuki Matsumura, Masaharu Shinkai, Takashi Sato, Shota Nakamura, Shunsuke Mori, Teru Kanda, Emi E Nakayama, Tatsuo Shioda, Tomohiro Kurosaki, Kiyoshi Takeda, Atsushi Kumanogoh, Hisashi Arase, Hironori Nakagami, Kazuo Yamashita, Yoshimasa Takahashi, Sho Yamasaki

    The Journal of experimental medicine   218 ( 12 )   2021.12

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    Adaptive immunity is a fundamental component in controlling COVID-19. In this process, follicular helper T (Tfh) cells are a subset of CD4+ T cells that mediate the production of protective antibodies; however, the SARS-CoV-2 epitopes activating Tfh cells are not well characterized. Here, we identified and crystallized TCRs of public circulating Tfh (cTfh) clonotypes that are expanded in patients who have recovered from mild symptoms. These public clonotypes recognized the SARS-CoV-2 spike (S) epitopes conserved across emerging variants. The epitope of the most prevalent cTfh clonotype, S864-882, was presented by multiple HLAs and activated T cells in most healthy donors, suggesting that this S region is a universal T cell epitope useful for booster antigen. SARS-CoV-2-specific public cTfh clonotypes also cross-reacted with specific commensal bacteria. In this study, we identified conserved SARS-CoV-2 S epitopes that activate public cTfh clonotypes associated with mild symptoms.

    DOI: 10.1084/jem.20211327

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  • Glycan engineering of the SARS-CoV-2 receptor-binding domain elicits cross-neutralizing antibodies for SARS-related viruses. Reviewed International journal

    Ryo Shinnakasu, Shuhei Sakakibara, Hiromi Yamamoto, Po-Hung Wang, Saya Moriyama, Nicolas Sax, Chikako Ono, Atsushi Yamanaka, Yu Adachi, Taishi Onodera, Takashi Sato, Masaharu Shinkai, Ryosuke Suzuki, Yoshiharu Matsuura, Noritaka Hashii, Yoshimasa Takahashi, Takeshi Inoue, Kazuo Yamashita, Tomohiro Kurosaki

    The Journal of experimental medicine   218 ( 12 )   2021.12

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    Broadly protective vaccines against SARS-related coronaviruses that may cause future outbreaks are urgently needed. The SARS-CoV-2 spike receptor-binding domain (RBD) comprises two regions, the core-RBD and the receptor-binding motif (RBM); the former is structurally conserved between SARS-CoV-2 and SARS-CoV. Here, in order to elicit humoral responses to the more conserved core-RBD, we introduced N-linked glycans onto RBM surfaces of the SARS-CoV-2 RBD and used them as immunogens in a mouse model. We found that glycan addition elicited higher proportions of the core-RBD-specific germinal center (GC) B cells and antibody responses, thereby manifesting significant neutralizing activity for SARS-CoV, SARS-CoV-2, and the bat WIV1-CoV. These results have implications for the design of SARS-like virus vaccines.

    DOI: 10.1084/jem.20211003

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  • Exit from germinal center to become quiescent memory B cells depends on metabolic reprograming and provision of a survival signal. Reviewed International journal

    Takeshi Inoue, Ryo Shinnakasu, Chie Kawai, Wataru Ise, Eiryo Kawakami, Nicolas Sax, Toshihiko Oki, Toshio Kitamura, Kazuo Yamashita, Hidehiro Fukuyama, Tomohiro Kurosaki

    The Journal of experimental medicine   218 ( 1 )   2021.1

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    A still unanswered question is what drives the small fraction of activated germinal center (GC) B cells to become long-lived quiescent memory B cells. We found here that a small population of GC-derived CD38intBcl6hi/intEfnb1+ cells with lower mTORC1 activity favored the memory B cell fate. Constitutively high mTORC1 activity led to defects in formation of the CD38intBcl6hi/intEfnb1+ cells; conversely, decreasing mTORC1 activity resulted in relative enrichment of this memory-prone population over the recycling-prone one. Furthermore, the CD38intBcl6hi/intEfnb1+ cells had higher levels of Bcl2 and surface BCR that, in turn, contributed to their survival and development. We also found that downregulation of Bcl6 resulted in increased expression of both Bcl2 and BCR. Given the positive correlation between the strength of T cell help and mTORC1 activity, our data suggest a model in which weak help from T cells together with provision of an increased survival signal are key for GC B cells to adopt a memory B cell fate.

    DOI: 10.1084/jem.20200866

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  • Influenza vaccination strategies targeting the hemagglutinin stem region. Reviewed International journal

    Hidehiro Fukuyama, Ryo Shinnakasu, Tomohiro Kurosaki

    Immunological reviews   296 ( 1 )   132 - 141   2020.7

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    Influenza is one of the best examples of highly mutable viruses that are able to escape immune surveillance. Indeed, in response to influenza seasonal infection or vaccination, the majority of the induced antibodies are strain-specific. Current vaccine against the seasonal strains with the strategy of surveillance-prediction-vaccine does not cover an unmet virus strain leading to pandemic. Recently, antibodies targeting conserved epitopes on the hemagglutinin (HA) protein have been identified, albeit rarely, and they often showed broad protection. These antibody discoveries have brought the feasibility to develop a universal vaccine. Most of these antibodies bind the HA stem domain and accumulate in the memory B cell compartment. Broadly reactive stem-biased memory responses were induced by infection with antigenically divergent influenza strains and were able to eradicate these viruses, together indicating the importance of generating memory B cells expressing high-quality anti-stem antibodies. Here, we emphasize recent progress in our understanding of how such memory B cells can be generated and discuss how these advances may be relevant to the quest for a universal influenza vaccine.

    DOI: 10.1111/imr.12887

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  • Requirement for memory B-cell activation in protection from heterologous influenza virus reinfection. Reviewed International journal

    Sarah Leach, Ryo Shinnakasu, Yu Adachi, Masatoshi Momota, Chieko Makino-Okamura, Takuya Yamamoto, Ken J Ishii, Hidehiro Fukuyama, Yoshimasa Takahashi, Tomohiro Kurosaki

    International immunology   31 ( 12 )   771 - 779   2019.11

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    Authorship:Corresponding author   Language:English   Publishing type:Research paper (scientific journal)  

    While two memory compartments, memory B cells and long-lived plasma cells, are thought to contribute to the successful establishment of memory recall responses, the unique roles of each cellular compartment are still unclear. Herein, by tracing influenza anti-hemagglutinin (HA)-specific antibodies in mice, we demonstrate that pre-existing antibodies secreted by long-lived plasma cells are essential for protection from reinfection with the same influenza virus, whereas protection from secondary infection with an antigenically distinct influenza virus requires memory B-cell activation. These activated memory B cells were largely specific for the conserved HA stem region, and generated sufficient levels of antibodies for protection from heterologous reinfection. Given that the anti-stem plasmablasts derived from the memory B cells were higher affinity than those from naive B cells, our results suggest that maturation of anti-stem memory B cells during primary influenza infection and their subsequent activation are required for protection from reinfection by mutant viruses.

    DOI: 10.1093/intimm/dxz049

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  • Exposure of an occluded hemagglutinin epitope drives selection of a class of cross-protective influenza antibodies. Reviewed International journal

    Yu Adachi, Keisuke Tonouchi, Arnone Nithichanon, Masayuki Kuraoka, Akiko Watanabe, Ryo Shinnakasu, Hideki Asanuma, Akira Ainai, Yusuke Ohmi, Takuya Yamamoto, Ken J Ishii, Hideki Hasegawa, Haruko Takeyama, Ganjana Lertmemongkolchai, Tomohiro Kurosaki, Manabu Ato, Garnett Kelsoe, Yoshimasa Takahashi

    Nature communications   10 ( 1 )   3883 - 3883   2019.8

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    Germinal center (GC) B cells at viral replication sites acquire specificity to poorly immunogenic but conserved influenza hemagglutinin (HA) epitopes. Here, high-throughput epitope mapping of local GC B cells is used to identify conserved HA epitope selecting cross-reactive antibodies that mediate heterosubtypic protection. A distinct feature of this epitope is an occlusion in the naive trimeric HA structure that is exposed in the post-fusion HA structure to occur under low pH conditions during viral replication. Importantly, systemic immunization by the post-fusion HA antigen results in GC B cells targeting the occluded epitope, and induces a class of protective antibodies that have cross-group specificity and afford protection independent of virus neutralization activity. Furthermore, this class of broadly protective antibodies develops at late time points and persists. Our results identify a class of cross-protective antibodies that are selected at the viral replication site, and provide insights into vaccine strategies using the occluded epitope.

    DOI: 10.1038/s41467-019-11821-6

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  • Functional clustering of B cell receptors using sequence and structural features Reviewed

    Zichang Xu, Songling Li, John Rozewicki, Kazuo Yamashita, Shunsuke Teraguchi, Takeshi Inoue, Ryo Shinnakasu, Sarah Leach, Tomohiro Kurosaki, Daron M. Standley

    MOLECULAR SYSTEMS DESIGN & ENGINEERING   4 ( 4 )   769 - 778   2019.8

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:ROYAL SOC CHEMISTRY  

    The repertoires of B cell receptors (BCRs), which can be captured by single cell-resolution sequencing technologies, contain a personal history of a donor's antigen exposure. One of the current challenges in analyzing such BCR sequence data is to assign sequences to groups with similar antigen and epitope binding specificity. This is a non-trivial task given the paucity of experimentally-determined antibody-antigen structures and the fact that different gene combinations in B cells can lead to receptors that target the same antigen and epitope. Here, we describe a method for clustering BCRs based on sequence and predicted structural features in order to predict groups with similar antigen and epitope binding specificity. We show that all known experimentally-determined structures of antibody-antigen complexes can be clustered accurately (AUC 0.981) and that use of predicted structural features improved the accuracy of the epitope classification. We next show that an independent and non-redundant set of 104 anti-HIV antibody sequences could be clustered corresponding to manually-assigned epitopes with a specificity of 99.7% and a sensitivity of 61.93%, with the imbalance in sensitivity due almost entirely to one group of antibodies-those that target the gp120 V3 loop, which do not form a single, well-defined cluster. We next examined a diverse set of anti-hemagglutinin BCR sequences from humans and mice. We observed clusters that included human or mouse sequences with anti-hemagglutinin antibodies of known structure. We also observed clusters that included both human and mouse sequences. Importantly, to the extent that the epitopes have been experimentally characterized, none of the observed clusters erroneously grouped different hemagglutinin binding regions. Taken together, these results demonstrate that the proposed clustering method provides high-throughput prediction of BCRs with common binding specificity across clonal lineages, donors and even species.

    DOI: 10.1039/c9me00021f

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  • Generation of memory B cells and their reactivation. Reviewed International journal

    Takeshi Inoue, Imogen Moran, Ryo Shinnakasu, Tri Giang Phan, Tomohiro Kurosaki

    Immunological reviews   283 ( 1 )   138 - 149   2018.5

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    The successful establishment of humoral memory response depends on at least two layers of defense. Pre-existing protective antibodies secreted by long-lived plasma cells act as a first line of defense against reinfection ("constitutive humoral memory"). Previously, a second line of defense in which pathogen-experienced memory B cells are rapidly reactivated to produce antibodies ("reactive humoral memory"), was considered as simply a back-up system for the first line (particularly for re-infection with homologous viruses). However, in the case of re-infection with similar but different strains of viruses, or in response to viral escape mutants, the reactive humoral memory plays a crucial role. Here, we review recent progress in our understanding of how memory B cells are generated in the pre-GC stage and during the GC reaction, and how these memory B cells are robustly reactivated with the help of memory Tfh cells to generate the secondary antibody response. In addition, we discuss how these advances may be relevant to the quest for a vaccine that can induce broadly reactive antibodies against influenza and HIV.

    DOI: 10.1111/imr.12640

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  • KLRG1+ Effector CD8+ T Cells Lose KLRG1, Differentiate into All Memory T Cell Lineages, and Convey Enhanced Protective Immunity. Reviewed International journal

    Dietmar Herndler-Brandstetter, Harumichi Ishigame, Ryo Shinnakasu, Valerie Plajer, Carmen Stecher, Jun Zhao, Melanie Lietzenmayer, Lina Kroehling, Akiko Takumi, Kohei Kometani, Takeshi Inoue, Yuval Kluger, Susan M Kaech, Tomohiro Kurosaki, Takaharu Okada, Richard A Flavell

    Immunity   48 ( 4 )   716 - 729   2018.4

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    Protective immunity against pathogens depends on the efficient generation of functionally diverse effector and memory T lymphocytes. However, whether plasticity during effector-to-memory CD8+ T cell differentiation affects memory lineage specification and functional versatility remains unclear. Using genetic fate mapping analysis of highly cytotoxic KLRG1+ effector CD8+ T cells, we demonstrated that KLRG1+ cells receiving intermediate amounts of activating and inflammatory signals downregulated KLRG1 during the contraction phase in a Bach2-dependent manner and differentiated into all memory T cell linages, including CX3CR1int peripheral memory cells and tissue-resident memory cells. "ExKLRG1" memory cells retained high cytotoxic and proliferative capacity distinct from other populations, which contributed to effective anti-influenza and anti-tumor immunity. Our work demonstrates that developmental plasticity of KLRG1+ effector CD8+ T cells is important in promoting functionally versatile memory cells and long-term protective immunity.

    DOI: 10.1016/j.immuni.2018.03.015

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  • The transcription factor Foxo1 controls germinal center B cell proliferation in response to T cell help. Reviewed International journal

    Takeshi Inoue, Ryo Shinnakasu, Wataru Ise, Chie Kawai, Takeshi Egawa, Tomohiro Kurosaki

    The Journal of experimental medicine   214 ( 4 )   1181 - 1198   2017.4

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    Germinal center (GC) B cells cycle between two states, the light zone (LZ) and the dark zone (DZ), and in the latter they proliferate and hypermutate their immunoglobulin genes. How this functional transition takes place is still controversial. In this study, we demonstrate that ablation of Foxo1 after GC development led to the loss of the DZ GC B cells and disruption of the GC architecture, which is consistent with recent studies. Mechanistically, even upon provision of adequate T cell help, Foxo1-deficient GC B cells showed less proliferative expansion than controls. Moreover, we found that the transcription factor BATF was transiently induced in LZ GC B cells in a Foxo1-dependent manner and that deletion of BATF similarly led to GC disruption. Thus, our results are consistent with a model where the switch from the LZ to the DZ is triggered after receipt of T cell help, and suggest that Foxo1-mediated BATF up-regulation is at least partly involved in this switch.

    DOI: 10.1084/jem.20161263

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  • Regulation of memory B and plasma cell differentiation. Reviewed International journal

    Ryo Shinnakasu, Tomohiro Kurosaki

    Current opinion in immunology   45   126 - 131   2017.4

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    Memory B cell generation and antibody production result from a differentiation process that begins when the surface BCR on naïve B cells binds an antigen. How the choice between these fates is tempo-spatially regulated is still obscure, but recent advances have reinforced the concept that the combination of B cell-intrinsic heterogeneity and -extrinsic heterogeneity provided by cells such as T cells is a key determinant. As molecular regulators, the transcription factors IRF4 and Bach2, which participate in these fate choices, have been emerging.

    DOI: 10.1016/j.coi.2017.03.003

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  • Regulated selection of germinal-center cells into the memory B cell compartment. Reviewed International journal

    Ryo Shinnakasu, Takeshi Inoue, Kohei Kometani, Saya Moriyama, Yu Adachi, Manabu Nakayama, Yoshimasa Takahashi, Hidehiro Fukuyama, Takaharu Okada, Tomohiro Kurosaki

    Nature immunology   17 ( 7 )   861 - 9   2016.7

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)  

    Despite the importance of memory B cells in protection from reinfection, how such memory cells are selected and generated during germinal-center (GC) reactions remains unclear. We found here that light-zone (LZ) GC B cells with B cell antigen receptors (BCRs) of lower affinity were prone to enter the memory B cell pool. Mechanistically, cells in this memory-prone fraction had higher expression of the transcriptional repressor Bach2 than that of their counterparts with BCRs of higher affinity. Haploinsufficiency of Bach2 resulted in reduced generation of memory B cells, independently of suppression of the gene encoding the transcription factor Blimp-1. Bach2 expression in GC cells was inversely correlated with the strength of help provided by T cells. Thus, we propose an instructive model in which weak help from T cells maintains relatively high expression of Bach2, which predisposes GC cells to enter the memory pool.

    DOI: 10.1038/ni.3460

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  • αβT cell receptors expressed by CD4(-)CD8αβ(-) intraepithelial T cells drive their fate into a unique lineage with unusual MHC reactivities. International journal

    Sofia Mayans, Dariusz Stepniak, Sakina Palida, Alexandre Larange, Joanna Dreux, Britni Arlian, Ryo Shinnakasu, Mitchell Kronenberg, Hilde Cheroutre, Florence Lambolez

    Immunity   41 ( 2 )   207 - 218   2014.8

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    Coreceptor CD4 and CD8αβ double-negative (DN) TCRαβ(+) intraepithelial T cells, although numerous, have been greatly overlooked and their contribution to the immune response is not known. Here we used T cell receptor (TCR) sequencing of single cells combined with retrogenic expression of TCRs to study the fate and the major histocompatibility complex (MHC) restriction of DN TCRαβ(+) intraepithelial T cells. The data show that commitment of thymic precursors to the DN TCRαβ(+) lineage is imprinted by their TCR specificity. Moreover, the TCRs they express display a diverse and unusual pattern of MHC restriction that is nonoverlapping with that of CD4(+) or CD8αβ(+) T cells, indicating that they sense antigens that are not recognized by the conventional T cell subsets. The new insights indicate that DN TCRαβ(+) T cells form a third lineage of TCRαβ T lymphocytes expressing a variable TCR repertoire, which serve nonredundant immune functions.

    DOI: 10.1016/j.immuni.2014.07.010

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  • Repression of the transcription factor Bach2 contributes to predisposition of IgG1 memory B cells toward plasma cell differentiation. Reviewed International journal

    Kohei Kometani, Rinako Nakagawa, Ryo Shinnakasu, Tomohiro Kaji, Andrei Rybouchkin, Saya Moriyama, Koji Furukawa, Haruhiko Koseki, Toshitada Takemori, Tomohiro Kurosaki

    Immunity   39 ( 1 )   136 - 47   2013.7

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    Memory B cells are essential for generating rapid and robust secondary antibody responses. It has been thought that the unique cytoplasmic domain of IgG causes the prompt activation of antigen-experienced IgG memory B cells. To assess this model, we have generated a mouse containing IgG1 B cells that have never encountered antigen. We found that, upon challenge, antigen-experienced IgG1 memory B cells rapidly differentiated into plasma cells, whereas nonexperienced IgG1 B cells did not, suggesting the importance of the stimulation history. In addition, our results suggest that repression of the Bach2 transcription factor, which results from antigen experience, contributes to predisposition of IgG1 memory B cells to differentiate into plasma cells.

    DOI: 10.1016/j.immuni.2013.06.011

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  • Transcriptional reprogramming of mature CD4⁺ helper T cells generates distinct MHC class II-restricted cytotoxic T lymphocytes. International journal

    Daniel Mucida, Mohammad Mushtaq Husain, Sawako Muroi, Femke van Wijk, Ryo Shinnakasu, Yoshinori Naoe, Bernardo Sgarbi Reis, Yujun Huang, Florence Lambolez, Michael Docherty, Antoine Attinger, Jr-Wen Shui, Gisen Kim, Christopher J Lena, Shinya Sakaguchi, Chizuko Miyamoto, Peng Wang, Koji Atarashi, Yunji Park, Toshinori Nakayama, Kenya Honda, Wilfried Ellmeier, Mitchell Kronenberg, Ichiro Taniuchi, Hilde Cheroutre

    Nature immunology   14 ( 3 )   281 - 9   2013.3

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    TCRαβ thymocytes differentiate into either CD8αβ(+) cytotoxic T lymphocytes or CD4(+) helper T cells. This functional dichotomy is controlled by key transcription factors, including the helper T cell master regulator ThPOK, which suppresses the cytolytic program in major histocompatibility complex (MHC) class II-restricted CD4(+) thymocytes. ThPOK continues to repress genes of the CD8 lineage in mature CD4(+) T cells, even as they differentiate into effector helper T cell subsets. Here we found that the helper T cell fate was not fixed and that mature, antigen-stimulated CD4(+) T cells terminated expression of the gene encoding ThPOK and reactivated genes of the CD8 lineage. This unexpected plasticity resulted in the post-thymic termination of the helper T cell program and the functional differentiation of distinct MHC class II-restricted CD4(+) cytotoxic T lymphocytes.

    DOI: 10.1038/ni.2523

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  • A novel role for IL-27 in mediating the survival of activated mouse CD4 T lymphocytes. International journal

    Gisen Kim, Ryo Shinnakasu, Christiaan J M Saris, Hilde Cheroutre, Mitchell Kronenberg

    Journal of immunology (Baltimore, Md. : 1950)   190 ( 4 )   1510 - 8   2013.2

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    IL-27, an IL-12 family cytokine, has pleiotropic functions in the differentiation and expansion of CD4(+) T cell subsets. In this study, we discovered a novel function of IL-27. CD4(+)CD45RB(high) T cells from mice deficient for the α-chain of IL-27 receptor failed to induce colitis in Rag(-/-) recipients, because of an inability of activated donor cells to survive. Interestingly, IL-27 was indispensable for the prevention of colitis by regulatory T cells, also because of a defect in long-term cell survival. IL-27 affected the survival of activated T lymphocytes, rather than promoting cell proliferation, by inhibiting Fas-mediated activation-induced T cell death, acting through the STAT3 signaling pathway. The addition of IL-27 during activation resulted in an increased cell number, which was correlated with decreased activation of both caspases 3 and 8. This prosurvival effect was attributed to downregulation of FasL and to the induction of the antiapoptotic protein cFLIP. Although activation induced cell death is an important mechanism for the maintenance of immunological homeostasis, protection of lymphocytes from excessive cell death is essential for effective immunity. Our data indicate that IL-27 has a crucial role in the inhibition of activation-induced cell death, thereby permitting Ag-driven T cell expansion.

    DOI: 10.4049/jimmunol.1201017

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  • Bcl6 controls the Th2 inflammatory activity of regulatory T cells by repressing Gata3 function. International journal

    Deepali V Sawant, Sarita Sehra, Evelyn T Nguyen, Rohit Jadhav, Kate Englert, Ryo Shinnakasu, Giao Hangoc, Hal E Broxmeyer, Toshinori Nakayama, Narayanan B Perumal, Mark H Kaplan, Alexander L Dent

    Journal of immunology (Baltimore, Md. : 1950)   189 ( 10 )   4759 - 69   2012.11

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    The transcriptional repressor Bcl6 is a critical arbiter of Th cell fate, promoting the follicular Th lineage while repressing other Th cell lineages. Bcl6-deficient (Bcl6(-/-)) mice develop a spontaneous and severe Th2-type inflammatory disease, thus warranting assessment of Bcl6 in regulatory T cell (Treg) function. Bcl6(-/-) Tregs were competent at suppressing T cell proliferation in vitro and Th1-type colitogenic T cell responses in vivo. In contrast, Bcl6(-/-) Tregs strongly exacerbated lung inflammation in a model of allergic airway disease and promoted higher Th2 responses, including systemic upregulation of microRNA-21. Further, Bcl6(-/-) Tregs were selectively impaired at controlling Th2 responses, but not Th1 and Th17 responses, in mixed chimeras of Bcl6(-/-) bone marrow with Foxp3(-/-) bone marrow. Bcl6(-/-) Tregs displayed increased levels of the Th2 transcription factor Gata3 and other Th2 and Treg genes. Bcl6 potently repressed Gata3 transcriptional transactivation, providing a mechanism for the increased expression of Th2 genes by Bcl6(-/-) Tregs. Gata3 has a critical role in regulating Foxp3 expression and functional fitness of Tregs; however, the signal that regulates Gata3 and restricts its transactivation of Th2 cytokines in Tregs has remained unexplored. Our results identify Bcl6 as an essential transcription factor regulating Gata3 activity in Tregs. Thus, Bcl6 represents a crucial regulatory layer in the Treg functional program that is required for specific suppression of Gata3 and Th2 effector responses by Tregs.

    DOI: 10.4049/jimmunol.1201794

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  • The transcription factor Sox4 is a downstream target of signaling by the cytokine TGF-β and suppresses T(H)2 differentiation. International journal

    Makoto Kuwahara, Masakatsu Yamashita, Kenta Shinoda, Soichi Tofukuji, Atsushi Onodera, Ryo Shinnakasu, Shinichiro Motohashi, Hiroyuki Hosokawa, Damon Tumes, Chiaki Iwamura, Veronique Lefebvre, Toshinori Nakayama

    Nature immunology   13 ( 8 )   778 - 86   2012.7

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    Sox4 is a transcription factor that regulates various developmental processes. Here we show that Sox4 was induced by TGF-β and negatively regulated the transcription factor GATA-3, the master regulator of function of T helper type 2 (T(H)2) cells, by two distinct mechanisms. First, Sox4 bound directly to GATA-3, preventing its binding to GATA-3 consensus DNA sequences. Second, Sox4 bound to the promoter region of the gene encoding interleukin 5 (IL-5), a T(H)2 cytokine, and prevented binding of GATA-3 to this promoter. T(H)2 cell-driven airway inflammation was modulated by alterations in Sox4 expression. Thus, Sox4 acted as a downstream target of TGF-β to inhibit GATA-3 function, T(H)2 differentiation and T(H)2 cell-mediated inflammation.

    DOI: 10.1038/ni.2362

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  • A set of genes associated with the interferon-γ response of lung cancer patients undergoing α-galactosylceramide-pulsed dendritic cell therapy. International journal

    Kohsuke Okita, Shinichiro Motohashi, Ryo Shinnakasu, Kaoru Nagato, Kazuki Yamasaki, Yasunori Sato, Hiroshi Kitamura, Atsushi Hijikata, Masakatsu Yamashita, Kanako Shimizu, Shin-Ichiro Fujii, Osamu Ohara, Masaru Taniguchi, Isao Sakaida, Toshinori Nakayama

    Cancer science   101 ( 11 )   2333 - 40   2010.11

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    Invariant natural killer T (iNKT) cells possess potent antitumor effects after activation with a specific glycolipid antigen, α-galactosylceramide (αGalCer). A phase I-II clinical study of αGalCer-pulsed dendritic cells (DC) to activate endogenous iNKT cells was previously performed in patients with non-small-cell lung cancer (NSCLC). In this clinical trial, the patients with increased interferon-γ (IFN-γ) production (>two-fold) in PBMC after the DC treatment (good responder group) experienced a prolonged overall survival time in comparison with the poor responder group. We extended the previous study and performed a microarray-based gene expression analysis using peripheral blood CD56(+) cells and CD56(-) CD3(+) T cells from patients enrolled in the above-mentioned clinical study. We sought to identify any biomarkers associated with the immune responses in this immunotherapy trial. Six patient samples corresponding to three subjects in the good responder group and three subjects in the poor responder group were included in the microarray analysis. Genes differentially expressed between pre-treatment and post-treatment samples were selected for analysis. Subsequently, genes that were only expressed in the good responder group or poor responder group were chosen. After these procedures, four selected genes were quantified by reverse transcriptase-polymerase chain reaction in another eight patient samples, and two genes, LTB4DH and DPYSL3, were confirmed to be candidate genes for the predictor of a good immune response. The expression profile of these two genes may be associated with the responsiveness of IFN-γ production after αGalCer-pulsed DC treatment.

    DOI: 10.1111/j.1349-7006.2010.01696.x

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  • Enhanced Th2 cell differentiation and allergen-induced airway inflammation in Zfp35-deficient mice. International journal

    Masayuki Kitajima, Chiaki Iwamura, Takako Miki-Hosokawa, Kenta Shinoda, Yusuke Endo, Yukiko Watanabe, Ryo Shinnakasu, Hiroyuki Hosokawa, Kahoko Hashimoto, Shinichiro Motohashi, Haruhiko Koseki, Osamu Ohara, Masakatsu Yamashita, Toshinori Nakayama

    Journal of immunology (Baltimore, Md. : 1950)   183 ( 8 )   5388 - 96   2009.10

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    Studies of human asthma and of animal models of allergic airway inflammation revealed a crucial role for Th2 cells in the pathogenesis of allergic asthma. Kruppel-type zinc finger proteins are the largest family of a regulatory transcription factor for cellular development and function. Zinc finger protein (Zfp) 35 is an 18-zinc finger motif-containing Kruppel-type zinc finger protein, while its function remains largely unknown. The aim of this study was to clarify the role of Zfp35 in the pathogenesis of Th2-dependent allergic inflammation, such as allergic asthma. We examined airway eosinophilic inflammation and hyperresponsiveness in two mouse models, which use our newly generated Zfp35-deficient (Zfp35(-/-)) mice and adoptive transfer of cells. In Zfp35(-/-) mice, Th2 cell differentiation, Th2 cytokine production, eosinophilic inflammation, and airway hyperresponsiveness were substantially enhanced. Furthermore, adoptive transfer of Ag-sensitized Zfp35(-/-) CD4 T cells into the asthmatic mice resulted in enhanced airway inflammation and airway hyperresponsiveness. These results indicate that Zfp35 controls Th2 cell differentiation, allergic airway inflammation, and airway hyperresponsiveness in a negative manner. Thus, Zfp35 may control Th2-dependent diseases, such as allergic asthma.

    DOI: 10.4049/jimmunol.0804155

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  • Gfi1-mediated stabilization of GATA3 protein is required for Th2 cell differentiation. International journal

    Ryo Shinnakasu, Masakatsu Yamashita, Makoto Kuwahara, Hiroyuki Hosokawa, Akihiro Hasegawa, Shinichiro Motohashi, Toshinori Nakayama

    The Journal of biological chemistry   283 ( 42 )   28216 - 25   2008.10

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    The differentiation of naive CD4 T cells into Th2 cells requires the T cell receptor-mediated activation of the ERK MAPK cascade. Little is known, however, in regard to how the ERK MAPK cascade regulates Th2 cell differentiation. We herein identified Gfi1 (growth factor independent-1) as a downstream target of the ERK MAPK cascade for Th2 cell differentiation. In the absence of Gfi1, interleukin-5 production and the change of histone modification at the interleukin-5 gene locus were severely impaired. Furthermore, the interferon gamma gene showed a striking activation in the Gfi1(-/-) Th2 cells. An enhanced ubiquitin/proteasome-dependent degradation of GATA3 protein was observed in Gfi1(-/-) Th2 cells, and the overexpression of GATA3 eliminated the defect of Th2 cell function in Gfi1-deficient Th2 cells. These data suggest that the T cell receptor-mediated induction of Gfi1 controls Th2 cell differentiation through the regulation of GATA3 protein stability.

    DOI: 10.1074/jbc.M804174200

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  • Bmi1 regulates memory CD4 T cell survival via repression of the Noxa gene. International journal

    Masakatsu Yamashita, Makoto Kuwahara, Akane Suzuki, Kiyoshi Hirahara, Ryo Shinnaksu, Hiroyuki Hosokawa, Akihiro Hasegawa, Shinichiro Motohashi, Atsushi Iwama, Toshinori Nakayama

    The Journal of experimental medicine   205 ( 5 )   1109 - 20   2008.5

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    The maintenance of memory T cells is central to the establishment of immunological memory, although molecular details of the process are poorly understood. In the absence of the polycomb group (PcG) gene Bmi1, the number of memory CD4(+) T helper (Th)1/Th2 cells was reduced significantly. Enhanced cell death of Bmi1(-/-) memory Th2 cells was observed both in vivo and in vitro. Among various proapoptotic genes that are regulated by Bmi1, the expression of proapoptotic BH3-only protein Noxa was increased in Bmi1(-/-) effector Th1/Th2 cells. The generation of memory Th2 cells was restored by the deletion of Noxa, but not by Ink4a and Arf. Direct binding of Bmi1 to the Noxa gene locus was accompanied by histone H3-K27 methylation. The recruitment of other PcG gene products and Dnmt1 to the Noxa gene was highly dependent on the expression of Bmi1. In addition, Bmi1 was required for DNA CpG methylation of the Noxa gene. Moreover, memory Th2-dependent airway inflammation was attenuated substantially in the absence of Bmi1. Thus, Bmi1 controls memory CD4(+) Th1/Th2 cell survival and function through the direct repression of the Noxa gene.

    DOI: 10.1084/jem.20072000

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  • Regulation of Th2 cell development by Polycomb group gene bmi-1 through the stabilization of GATA3. International journal

    Hiroyuki Hosokawa, Motoko Y Kimura, Ryo Shinnakasu, Akane Suzuki, Takako Miki, Haruhiko Koseki, Maarten van Lohuizen, Masakatsu Yamashita, Toshinori Nakayama

    Journal of immunology (Baltimore, Md. : 1950)   177 ( 11 )   7656 - 64   2006.12

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    The Polycomb group (PcG) gene products regulate the maintenance of the homeobox gene expression in Drosophila and vertebrates and also the cell cycle progression in thymocytes and Th2 cell differentiation in mature T cells. We herein studied the role of PcG gene bmi-1 product in Th1/Th2 cell differentiation and found that Bmi-1 facilitates Th2 cell differentiation in a Ring finger-dependent manner. Biochemical studies indicate that Bmi-1 interacts with GATA3 in T cells, which is dependent on the Ring finger of Bmi-1. The overexpression of Bmi-1 resulted in a decreased ubiquitination and an increased protein stability of GATA3. In bmi-1-deficient Th cells, the levels of Th2 cell differentiation decreased as the degradation and ubiquitination on GATA3 increased. Therefore, Bmi-1 plays a crucial role in the control of Th2 cell differentiation in a Ring finger-dependent manner by regulating GATA3 protein stability.

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  • Critical YxKxHxxxRP motif in the C-terminal region of GATA3 for its DNA binding and function. International journal

    Ryo Shinnakasu, Masakatsu Yamashita, Kenta Shinoda, Yusuke Endo, Hiroyuki Hosokawa, Akihiro Hasegawa, Shinji Ikemizu, Toshinori Nakayama

    Journal of immunology (Baltimore, Md. : 1950)   177 ( 9 )   5801 - 10   2006.11

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    A zinc finger transcription factor, GATA3, plays an essential role in the development of T cells and the functional differentiation into type 2 Th cells. Two transactivation domains and two zinc finger regions are known to be important for the GATA3 function, whereas the role for other regions remains unclear. In this study we demonstrated that a conserved YxKxHxxxRP motif (aa 345-354) adjacent to the C-terminal zinc finger domain of GATA3 plays a critical in its DNA binding and functions, including transcriptional activity, the ability to induce chromatin remodeling of the Th2 cytokine gene loci, and Th2 cell differentiation. A single point mutation of the key amino acid (Y, K, H, R, and P) in the motif abrogated GATA3 functions. A computer simulation analysis based on the solution structure of the chicken GATA1/DNA complex supported the importance of this motif in GATA3 DNA binding. Thus, we identified a novel conserved YxKxHxxxRP motif adjacent to the C-terminal zinc finger domain of GATA3 that is indispensable for GATA3 DNA binding and functions.

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  • Crucial role of MLL for the maintenance of memory T helper type 2 cell responses. International journal

    Masakatsu Yamashita, Kiyoshi Hirahara, Ryo Shinnakasu, Hiroyuki Hosokawa, Satoko Norikane, Motoko Y Kimura, Akihiro Hasegawa, Toshinori Nakayama

    Immunity   24 ( 5 )   611 - 22   2006.5

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    The Mixed-Lineage Leukemia (MLL) gene, a mammalian homolog of the Drosophila trithorax, is implicated in regulating the maintenance of Hox gene expression and hematopoiesis. The physiological functions of MLL in the immune system remain largely unknown. Although MLL(+/-) CD4 T cells differentiate normally into antigen-specific effector Th1/Th2 cells in vitro, the ability of memory Th2 cells to produce Th2 cytokines was selectively reduced. Furthermore, histone modifications at the Th2 cytokine gene loci were not properly maintained in MLL(+/-) memory Th2 cells. The reduced expression of MLL in memory Th2 cells resulted in decreased GATA3 expression accompanied with impaired GATA3 locus histone modifications. The direct association of MLL with the GATA3 locus and the Th2 cytokine gene loci was demonstrated. Memory Th2 cell-dependent allergic airway inflammation was decreased in MLL(+/-) Th2 cell-transferred mice. Thus, a crucial role for MLL in the maintenance of memory Th2 cell function is indicated.

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  • Regulation of allergic airway inflammation through Toll-like receptor 4-mediated modification of mast cell function. International journal

    Yukiko I Nigo, Masakatsu Yamashita, Kiyoshi Hirahara, Ryo Shinnakasu, Masamichi Inami, Motoko Kimura, Akihiro Hasegawa, Yoichi Kohno, Toshinori Nakayama

    Proceedings of the National Academy of Sciences of the United States of America   103 ( 7 )   2286 - 91   2006.2

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    In a mouse experimental asthma model, the administration of bacterial lipopolysaccharide (LPS), particularly at low doses, enhances the levels of ovalbumin (OVA)-induced eosinophilic airway inflammation. In an effort to clarify the cellular and molecular basis for the LPS effect, we demonstrate that the OVA-induced eosinophilic inflammation in the lung is dramatically increased by the administration of LPS in wild-type mice, whereas such increase was not observed in mast-cell-deficient mice or Toll-like receptor (TLR)4-deficient mice. Adoptive transfer of bone-marrow-derived mast cells (BMMCs) from wild-type, but not from TLR4-deficient, mice restored the increased eosinophilic inflammation in mast-cell-deficient mice. Wild-type BMMCs pretreated with LPS in vitro also reconstituted the eosinophilic inflammation. Moreover, in vitro analysis revealed that the treatment of BMMCs with LPS resulted in NF-kappaB activation, sustained up-regulation of GATA1 and -2 expression, and increased the capability to produce IL-5 and -13. Dramatic increases in the expression of IL-5 and -13 and Eotaxin 2 were detected in LPS-treated BMMCs after costimulation with LPS and IgE/Ag. Overexpression of GATA1, but not GATA2, in MC9 mast cells resulted in increased transcriptional activity of IL-4, -5, and -13. Furthermore, the levels of transcription of Th2 cytokines in BMMCs were decreased by the introduction of small interfering RNA for GATA1. Thus, mast cells appear to control allergic airway inflammation after their activation and modulation through TLR4-mediated induction of GATA1 and subsequent increase in Th2 cytokine production.

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  • Ras-ERK MAPK cascade regulates GATA3 stability and Th2 differentiation through ubiquitin-proteasome pathway. International journal

    Masakatsu Yamashita, Ryo Shinnakasu, Hikari Asou, Motoko Kimura, Akihiro Hasegawa, Kahoko Hashimoto, Naoya Hatano, Masato Ogata, Toshinori Nakayama

    The Journal of biological chemistry   280 ( 33 )   29409 - 19   2005.8

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    Differentiation of naive CD4 T cells into Th2 cells requires protein expression of GATA3. Interleukin-4 induces STAT6 activation and subsequent GATA3 transcription. Little is known, however, on how T cell receptor-mediated signaling regulates GATA3 and Th2 cell differentiation. Here we demonstrated that T cell receptor-mediated activation of the Ras-ERK MAPK cascade stabilizes GATA3 protein in developing Th2 cells through the inhibition of the ubiquitin-proteasome pathway. Mdm2 was associated with GATA3 and induced ubiquitination on GATA3, suggesting its role as a ubiquitin-protein isopeptide ligase for GATA3 ubiquitination. Thus, the Ras-ERK MAPK cascade controls GATA3 protein stability by a post-transcriptional mechanism and facilitates GATA3-mediated chromatin remodeling at Th2 cytokine gene loci leading to successful Th2 cell differentiation.

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  • Chromatin remodeling of the Th2 cytokine gene loci Reviewed International journal

    Nakayama, T., Yamashita, M., Kimura, M., Hasegawa, A., Omori, M., Inami, M., Motohashi, S., Kitajima, M., Hashimoto, K., Hosokawa, H., Shinnakasu, R.

    International Congress Series   1285 ( - )   137 - 144   2005

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    DOI: 10.1016/j.ics.2005.08.007

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  • Interleukin (IL)-4-independent maintenance of histone modification of the IL-4 gene loci in memory Th2 cells. International journal

    Masakatsu Yamashita, Ryo Shinnakasu, Yukiko Nigo, Motoko Kimura, Akihiro Hasegawa, Masaru Taniguchi, Toshinori Nakayama

    The Journal of biological chemistry   279 ( 38 )   39454 - 64   2004.9

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    Interleukin (IL)-4-induced STAT6 activation and the subsequent up-regulation of GATA3 are crucial for the induction of chromatin remodeling of the Th2 cytokine gene loci as Th2 cells undergo development. This study probes the role of these molecules in the maintenance of memory Th2 cells. IL-4 was not required to maintain the capability for Th2 cytokine production in in vivo generated antigen-specific memory Th2 cells. Histone H3-K9/14 hyperacetylation and intergenic transcripts associated with the IL-4 gene locus were preserved in the absence of IL-4, but those associated with the IL-13 gene were partially IL-4-dependent. Histone H3-K4 methylation of the IL-13 and IL-4 gene loci was fully preserved in memory Th2 cells and accompanied by memory cell-specific accumulation of Pol II complex to highly restricted sites. Thus, memory Th2 cells maintain a unique Th2-specific remodeled chromatin in the IL-4 and IL-13 gene loci by active molecular events that are IL-4-independent.

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MISC

  • インフルエンザ感染における液性免疫記憶形成機序

    新中須 亮

    先進医薬研究振興財団研究成果報告集   2019年度   106 - 107   2020.3

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  • 転写とエピゲノム制御による免疫細胞の分化制御と疾患 液性免疫記憶形成機構

    黒崎 知博, 伊勢 渉, 新中須 亮, 井上 毅

    生命科学系学会合同年次大会   2017年度   [2AS22 - 4]   2017.12

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    Language:Japanese   Publisher:生命科学系学会合同年次大会運営事務局  

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  • メモリーB細胞選択メカニズム

    新中須 亮, 黒崎 知博

    日本臨床免疫学会会誌   39 ( 4 )   317 - 317   2016.8

  • 腫瘍免疫を担う細胞傷害性T細胞を誘導する樹状細胞のイメージング(Imaging of dendritic cells important for anti-tumor cytotoxic T lymphocytes)

    岡田 峰陽, 北野 正寛, 新中須 亮, 黒崎 知博, 改正 恒康

    日本癌学会総会記事   73回   IS4 - 2   2014.9

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  • Pasteurella multocida P-1059株及び変異P-1059B株の付着性蛋白の分子解析(Molecular Characterization of an Adhesive Protein of Pasteurella multocida Strain P-1059 and its Variant Strain P-1059B)

    Borrathybay Entomack, Sthitmatee Nattawooti, 鈴木 健一, 新中須 亮, 土田 修一, 阿久澤 良造, 片岡 康, 澤田 拓士

    日本獣医生命科学大学研究報告   ( 57 )   90 - 99   2008.12

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  • Gfi1はGATA3蛋白質の安定化を介してTh2細胞分化を制御する

    山下 政克, 新中須 亮, 桑原 誠, 中山 俊憲

    日本生化学会大会・日本分子生物学会年会合同大会講演要旨集   81回・31回   1T20 - 8   2008.11

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  • 【T細胞研究新章 免疫疾患解明に向けた新たな展開】メモリーTh2機能のエピジェネティック制御

    新中須 亮, 山下 政克, 中山 俊憲

    細胞工学   27 ( 2 )   150 - 155   2008.1

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  • Bmi1はNoxa遺伝子の発現調節を介してメモリーCD4 T細胞の生存を制御する

    山下 政克, 桑原 誠, 新中須 亮, 細川 裕之, 中山 俊憲

    日本生化学会大会・日本分子生物学会年会合同大会講演要旨集   80回・30回   3T22 - 1   2007.11

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  • Th2細胞分化に必要なGATA3機能部位の同定

    新中須 亮, 石井 崇太郎, 金子 高明, 平原 潔, 則兼 聡子, 山下 政克, 中山 俊憲

    日本免疫学会総会・学術集会記録   34   130 - 130   2004.11

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  • Th2細胞分化に必要なGATA3機能部位の同定

    山下 政克, 鵜飼 磨貴, 菅谷 薫子, 天田 由幸, 新中須 亮, 金子 高明, 谷口 克, 中山 俊憲

    日本免疫学会総会・学術集会記録   33   206 - 206   2003.11

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  • 単クローン抗体によるavian Pasteurella multocidaの39kDa蛋白の特徴(Characterization of the 39kDa protein of avian Pasteurella multocida by monoclonal antibody)

    アルハジ・アリフサム, 澤田 拓士, ボラテバイ・アントマック, 新中須 亮, 片岡 康, 畠山 仁, 大槻 紀之, 伊藤 治

    日本獣医学会学術集会講演要旨集   135回   116 - 116   2003.3

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Research Projects

  • 変異インフルエンザウイルス感染防御に有効な記憶B細胞活性化機構の解明

    2021.4 - 2024.3

    日本学術振興会  科学研究費助成事業 基盤研究(B)  基盤研究(B)

    新中須 亮

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    Grant amount:\17290000 ( Direct Cost: \13300000 、 Indirect Cost:\3990000 )

    2021年度は、まず始めに、メモリーB細胞を中心としたStem特異的B細胞が変異ウイルス抗原により活性化される際の生体内での動態に関してフローサイトメトリーとシングルセルレパトア解析による評価を行った。一次インフルエンザ感染で誘導されたStem特異的メモリーB細胞とその後、変異ウイルス株によるワクチン接種時にナイーブやメモリーB細胞から誘導されるStem特異的GC B細胞ならびに、プラズマ細胞について、一次メモリー細胞を特異的に標識できるマウスモデルを用いて評価したところ、主に活性化している細胞はメモリー由来の細胞であることが確認された。また、その際のレパトアを評価したところ、プラズマ細胞への分化は全ての1次メモリー細胞からまんべんなく誘導されていたのに対し、2次胚中心(GC)B細胞は一部の1次メモリー細胞からのみ誘導されていた。これらの細胞に関する特徴に関しては現在、シングルセルRNAseqによる解析中である。また、2次メモリー細胞の誘導に関する評価も実施中である。
    また、変異抗原によるワクチン接種後の免疫応答に影響を与えるうる要素の評価ならびにメカニズム解明と効率的なメモリーコンパートメント形成誘導法の探索として、2021年度は、i)存在する1次メモリーB細胞の量による影響、ii)2次感染時に誘導された抗体によるウイルス抗原マスキング効果による影響、について評価を行った。1次メモリーB細胞の量による影響に関しては、メモリー細胞に誘導したStem特異的BCRノックインB細胞の移入実験を行い、プラズマ細胞の誘導に関しては数による影響は大きくなかったのに対し、2次GC B細胞の誘導には数が大きく影響することが明らかとなった。さらに、プラズマ細胞欠失誘導マウスを用いたStem特異的抗体による影響の評価も行い、2次GC細胞誘導には抗体からの影響も存在する可能性が示唆された。

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  • Elucidation of induction and maintenance mechanism of universal cross reactive B cells against influenza virus

    2017.4 - 2020.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Scientific Research (C)  Grant-in-Aid for Scientific Research (C)

    Shinnakasu Ryo

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    Grant amount:\4810000 ( Direct Cost: \3700000 、 Indirect Cost:\1110000 )

    In this research , I addressed the question "why Stem-specific (universal cross reactive) memory B cells can be rarely detected in the body. For this question I clarified three things as below. (1) Stem-specific memory B cells have low in-vivo maintenance ability. (2) Stem-specific B cells are easily activated in an environment lacking Treg cells. (3) Endogenous T-bet does not affect induction of stem-specific memory B cells. From the above results, it was speculated that the number of stem-specific memory B cell progenitor cells was small due to the anergy state by autoantigen reactivity. Currently, detailed analysis of reactivity of cloned stem-specific BCR to self-antigen is underway.

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  • Critical role for differentiation and maintenance of B-1 cells by transcriptional regulator Menin

    2014.4 - 2016.3

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists (B)  Grant-in-Aid for Young Scientists (B)

    Shinnakasu Ryo

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    Grant amount:\3900000 ( Direct Cost: \3000000 、 Indirect Cost:\900000 )

    B-1 cells, which have repertoires showing the cross reactivity to various pathogens in advance, perform an important role in the early stage of infection of the defense mechanism. Although the function of B-1 cells has been elucidated well so far but differentiation and maintenance mechanism of B-1 cells were not progressing. In this project, I have identified the transcriptional regulator Menin as a candidate gene involved in differentiation and maintenance of B-1 cells. From the analysis using B cell specific Menin deficient mice, significantly reduction of of B-1 cells number and reduction of titers of natural antibodies were revealed in Menin deficient mice. As a function of Menin to differentiation and maintenance of B-1 cells, it is revealed that Menin has a critical role for the survive or maintenance of precursor cells of B-1 cells.

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  • Functional analysis of transcription factor Gfi1 for the regulation of allergic inflammation

    2007 - 2008

    Japan Society for the Promotion of Science  Grants-in-Aid for Scientific Research Grant-in-Aid for Young Scientists (Start-up)  Grant-in-Aid for Young Scientists (Start-up)

    SHINNAKASU Ryo

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    Grant amount:\3075000 ( Direct Cost: \2670000 、 Indirect Cost:\405000 )

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