Updated on 2025/03/27

写真a

 
Murakami Yasunori
 
Organization
Graduate School of Science and Engineering (Science) Major of Science and Engineering Biology Professor
Title
Professor
Contact information
メールアドレス
External link

Degree

  • Ph.D.

Research Interests

  • Development

  • Vertebrates

  • Brain

  • Genes

  • Evolution

Research Areas

  • Life Science / Morphology and anatomical structure  / Evolutionary neuromorphology

Professional Memberships

Papers

  • Comparative analysis of Hmx expression and the distribution of neuronal somata in the trigeminal ganglion in lamprey and shark: insights into the homology of the trigeminal nerve branches and the evolutionary origin of the vertebrate jaw Reviewed

    Motoki Tamura, Ryota Ishikawa, Yuki Nakanishi, Juan Pascual-Anaya, Makiko Fukui, Takashi Saitou, Fumiaki Sugahara, Filippo M. Rijli, Shigeru Kuratani, Daichi G. Suzuki, Yasunori Murakami

    Zoological Letters   9 ( 1 )   2023.12

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    Authorship:Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media LLC  

    Abstract

    The evolutionary origin of the jaw remains one of the most enigmatic events in vertebrate evolution. The trigeminal nerve is a key component for understanding jaw evolution, as it plays a crucial role as a sensorimotor interface for the effective manipulation of the jaw. This nerve is also found in the lamprey, an extant jawless vertebrate. The trigeminal nerve has three major branches in both the lamprey and jawed vertebrates. Although each of these branches was classically thought to be homologous between these two taxa, this homology is now in doubt. In the present study, we compared expression patterns of Hmx, a candidate genetic marker of the mandibular nerve (rV<sub>3</sub>, the third branch of the trigeminal nerve in jawed vertebrates), and the distribution of neuronal somata of trigeminal nerve branches in the trigeminal ganglion in lamprey and shark. We first confirmed the conserved expression pattern of Hmx1 in the shark rV<sub>3</sub> neuronal somata, which are distributed in the caudal part of the trigeminal ganglion. By contrast, lamprey Hmx genes showed peculiar expression patterns, with expression in the ventrocaudal part of the trigeminal ganglion similar to Hmx1 expression in jawed vertebrates, which labeled the neuronal somata of the second branch. Based on these results, we propose two alternative hypotheses regarding the homology of the trigeminal nerve branches, providing new insights into the evolutionary origin of the vertebrate jaw.

    DOI: 10.1186/s40851-023-00222-9

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    Other Link: https://link.springer.com/article/10.1186/s40851-023-00222-9/fulltext.html

  • Forebrain Architecture and Development in Cyclostomes, with Reference to the Early Morphology and Evolution of the Vertebrate Head Reviewed International journal

    Fumiaki Sugahara, Yasunori Murakami, Juan Pascual-Anaya, Shigeru Kuratani

    Brain, Behavior and Evolution   96 ( 4-6 )   305 - 317   2022

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    Language:English   Publishing type:Research paper (scientific journal)   Publisher:S. Karger AG  

    The vertebrate head and brain are characterized by highly complex morphological patterns. The forebrain, the most anterior division of the brain, is subdivided into the diencephalon, hypothalamus, and telencephalon from the neuromeric subdivision into prosomeres. Importantly, the telencephalon contains the cerebral cortex, which plays a key role in higher order cognitive functions in humans. To elucidate the evolution of the forebrain regionalization, comparative analyses of the brain development between extant jawed and jawless vertebrates are crucial. Cyclostomes – lampreys and hagfishes – are the only extant jawless vertebrates, and diverged from jawed vertebrates (gnathostomes) over 500 million years ago. Previous developmental studies on the cyclostome brain were conducted mainly in lampreys because hagfish embryos were rarely available. Although still scarce, the recent availability of hagfish embryos has propelled comparative studies of brain development and gene expression. By integrating findings with those of cyclostomes and fossil jawless vertebrates, we can depict the morphology, developmental mechanism, and even the evolutionary path of the brain of the last common ancestor of vertebrates. In this review, we summarize the development of the forebrain in cyclostomes and suggest what evolutionary changes each cyclostome lineage underwent during brain evolution. In addition, together with recent advances in the head morphology in fossil vertebrates revealed by CT scanning technology, we discuss how the evolution of craniofacial morphology and the changes of the developmental mechanism of the forebrain towards crown gnathostomes are causally related.

    DOI: 10.1159/000519026

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  • Evolutionary and Developmental Perspectives on the Origin and Diversification of the Vertebrate Cerebellum

    Yasunori Murakami, Fumiaki Sugahara

    Contemporary Clinical Neuroscience   3 - 24   2021

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    Language:English   Publishing type:Part of collection (book)   Publisher:Springer Nature  

    An anteroposterior arrangement of brain compartments from the telencephalon to the rhombencephalon is observed in all extant vertebrates. Moreover, the stereotyped framework of longitudinal and commissural tracts is also conserved among vertebrates. In contrast, the size and morphology of brain regions have diversified into a variety of forms. Thus, vertebrate brains are thought to have inherited their basic organization during evolution, while the size and functions of brain subregions may have been modified in vertebrate lineages. In particular, the vertebrate cerebellum, which serves as the integrative center for motor coordination, shows remarkable morphological diversity. In vertebrates, the human cerebellum not only functions as a center for motor coordination and balance but is also involved in various cognitive functions. Conversely, the cerebella of amphibians and reptiles are small and rudimentary. Thus, the cerebellum seems to have evolved independently between species in relation to the evolution of sensory perception and motor regulation. In general, the primordium of the vertebrate cerebellum appears in the caudal part of the midbrain/hindbrain boundary, called the isthmic organizer (IsO), which is marked by the specific expression of several transcription factors and signaling molecules. Recent studies have shown that the IsO is present in several vertebrate lineages, including cyclostomes, that bifurcated from other vertebrates in the early evolutionary period. Furthermore, the molecular mechanisms underlying the differentiation of excitatory and inhibitory neurons in the cerebellum or cerebellum-like regions are also conserved between lineages. These results indicate that the basic mechanism underlying the specification of the cerebellum may have been established in the last common ancestor of vertebrates.

    DOI: 10.1007/978-3-030-75817-2_1

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  • Genetic Mechanism for the Cyclostome Cerebellar Neurons Reveals Early Evolution of the Vertebrate Cerebellum. Reviewed International journal

    Fumiaki Sugahara, Juan Pascual-Anaya, Shigehiro Kuraku, Shigeru Kuratani, Yasunori Murakami

    Frontiers in cell and developmental biology   9   700860 - 700860   2021

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    Authorship:Last author   Language:English   Publishing type:Research paper (scientific journal)  

    The vertebrate cerebellum arises at the dorsal part of rhombomere 1, induced by signals from the isthmic organizer. Two major cerebellar neuronal subtypes, granule cells (excitatory) and Purkinje cells (inhibitory), are generated from the anterior rhombic lip and the ventricular zone, respectively. This regionalization and the way it develops are shared in all extant jawed vertebrates (gnathostomes). However, very little is known about early evolution of the cerebellum. The lamprey, an extant jawless vertebrate lineage or cyclostome, possesses an undifferentiated, plate-like cerebellum, whereas the hagfish, another cyclostome lineage, is thought to lack a cerebellum proper. In this study, we found that hagfish Atoh1 and Wnt1 genes are co-expressed in the rhombic lip, and Ptf1a is expressed ventrally to them, confirming the existence of r1's rhombic lip and the ventricular zone in cyclostomes. In later stages, lamprey Atoh1 is downregulated in the posterior r1, in which the NeuroD increases, similar to the differentiation process of cerebellar granule cells in gnathostomes. Also, a continuous Atoh1-positive domain in the rostral r1 is reminiscent of the primordium of valvula cerebelli of ray-finned fishes. Lastly, we detected a GAD-positive domain adjacent to the Ptf1a-positive ventricular zone in lampreys, suggesting that the Ptf1a-positive cells differentiate into some GABAergic inhibitory neurons such as Purkinje and other inhibitory neurons like in gnathostomes. Altogether, we conclude that the ancestral genetic programs for the formation of a distinct cerebellum were established in the last common ancestor of vertebrates.

    DOI: 10.3389/fcell.2021.700860

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  • FGF- and SHH-based molecular signals regulate barbel and craniofacial development in catfish. Reviewed

    Tatsuya Itoyama, Makiko Fukui, Mashumi Kawaguchi, Saki Kaneko, Fumiaki Sugahara, Yasunori Murakami

    Zoological Leters   5 ( 19 )   eCollection   2019.6

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    Language:English   Publishing type:Research paper (scientific journal)  

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Books

  • Developmental origin and evolution of the cerebellum:Insights from cyclostomes

    Fumiaki Sugahara, Yasunori Murakami( Role: Joint author)

    2024.4 

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  • Clinical Neuroscience

    Yasunori MURAKAMI( Role: Joint author1544-1548)

    2023.12 

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  • 脳の進化・発生から見た視床下部

    Yasunori MURAKAMI( Role: Joint authorACTH RELATED PEPTIDES Vol.32 【特別講演】p2-p5)

    第32 回間脳· 下垂体· 副腎系研究会報告 (旧:CRH・ACTH 研究会)  2022.5 

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  • Cerebellum as a CNS Hub (Contemporary Clinical Neuroscience)

    Yasunori Murakami, Fumiaki Sugahara( Role: Joint authorEvolutionary and developmental perspectives on the origin and the diversification of the vertebrate cerebellum)

    Springer  2021.11  ( ISBN:3030758168

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    Total pages:564  

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  • Evolutionary neurorogy of vertebrates

    村上 安則, 倉谷, 滋( Role: Sole author)

    2021.4  ( ISBN:4320009347

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    Total pages:234   Language:Japanese  

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Presentations

  • 脊椎動物の脳神経系の起源と多様化 Invited

    村上安則

    システム視覚科学研究センター主催セミナー  2022.2 

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    Event date: 2022.2

    Language:Japanese   Presentation type:Oral presentation (invited, special)  

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  • Evolution of the vertebrate brain Invited

    Yasunori Murakami

    Ehime University Online Winter School of Science, Haiku and Pop  2021.12 

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    Event date: 2021.12

    Language:English   Presentation type:Oral presentation (invited, special)  

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  • Evolution and development of the vertebrate hypothalamus Invited

    Yasunori Murakami

    第32回 間脳・下垂体・副腎系研究会(ロシュ共催セミナー)  2021.9 

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    Event date: 2021.9 - 2021.10

    Language:Japanese   Presentation type:Oral presentation (invited, special)  

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  • 円口類から紐解く脊椎動物の脳進化 Invited

    Yasunori MURAKAMI

    Niche Neuro-Angiology Conference  2023.6 

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    Language:Japanese  

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  • 脊椎動物の脳の起源と進化 円口類を用いた進化発生学的研究 Invited

    村上安則

    「情報フォトニクスによる次世代生命科学研究の創生」キックオフシンポジウム  2023.3 

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    Language:Japanese   Presentation type:Oral presentation (invited, special)  

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Awards

  • 理学部研究奨励賞

    2020.12   Ehime University  

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  • 理学部研究奨励賞

    2019.12   Ehime University  

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  • DGD奨励賞2018

    2018.7   Japanese Society of Developmental Biologists   Expression patterns of Sema3A in developing amniote limbs: With reference to the diversification of peripheral nerve innervation.

    Kanami Noguchi, Ryota Ishikawa, im

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  • DGD奨励賞2016

    2016.7   Japanese Society of Developmental Biologists   Development of the thalamo-dorsal ventricular ridge tract in the Chinese soft-shelled turtle, Pelodiscus sinensis.

    Yasuhiko Tosa, im

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Research Projects

  • 脊椎動物の終脳外套の進化的可塑性に関わる分子機構の解明

    2023.4 - 2026.3

    Japan society for the promotion of science  Grants-in-Aid for Scientific Research 

    Yasunori MURAKAMI

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    Authorship:Principal investigator 

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  • 脊椎動物の脳における感覚中枢の起源と進化に関わる分子基盤

    2020.4 - 2023.3

    独立行政法人日本学術振興会  科学研究費助成事業  基盤研究(C)(一般)

    村上安則

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    Authorship:Principal investigator 

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  • 昆虫から解き明かす脳進化研究ユニット

    2020.4 - 2023.3

    愛媛大学  リサーチユニット  競争的資金

    村上安則

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    Authorship:Coinvestigator(s) 

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  • 無顎類ヤツメウナギを用いた脊椎動物の脳進化に関する研究

    2020.4 - 2021.3

    理化学研究所 生命機能科学研究センター  理化学研究所共同研究 

    村上安則

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    Authorship:Principal investigator 

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  • 無顎類ヤツメウナギを用いた脊椎動物の脳進化に関する研究

    2017.4 - 2020.3

    理化学研究所共同研究  理化学研究所共同研究 

    村上 安則

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    Authorship:Principal investigator  Grant type:Competitive

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Teaching Experience (On-campus)

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Social Activities

  • 進化神経学

    Role(s): Lecturer

    筑波大学  筑波大学 大学院生向け集中講義  2024.12

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    Type:Visiting lecture

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  • 脊椎動物の脳形成機構の起源

    Role(s): Lecturer

    立命館大学  立命館大学講義 進化情報学  2024.12

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    Type:Visiting lecture

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  • 脊椎動物の脳形成機構の起源

    Role(s): Lecturer, Advisor

    立命館大学 立命館大学講義 進化情報学  2023.12

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    Type:Research consultation

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  • 脊椎動物の脳形成機構の起源

    Role(s): Lecturer

    立命館大学  立命館大学講義 進化情報学  2022.12

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    Type:Lecture

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  • 脳のかたちと進化

    Role(s): Appearance

    愛媛大学  高大連携講座  2020.12

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    Type:Visiting lecture

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Media Coverage

  • The amazingly diverse brains of vertebrates Newspaper, magazine

    AXIS Inc.  AXIS World's design magazine  pp70-75  2022.10

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    Author:Other 

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  • NHKスペシャル 生命大躍進 第3集「ついに 知性 が生まれた」 TV or radio program

    NHK  NHKスペシャル  2014.7

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