Updated on 2025/03/27

写真a

 
Oto Yumeki
 
Organization
Graduate School of Science and Engineering (Science) Major of Science and Engineering Biology Associate Professor
Title
Associate Professor
Contact information
メールアドレス
External link

Degree

  • PhD (Science) ( 2021.3   Kyoto University )

Research Interests

  • 動物行動学

  • 生態学

  • 通し回遊性

  • 進化的制約

  • 生活史戦略

  • 生活史進化

  • ニホンウナギ

  • 保全生態学

  • ハゼ科魚類

  • 多種共存機構

  • 浸透圧調節

  • 汽水域

  • 両側回遊性

Research Areas

  • Life Science / Ecology and environment

  • Life Science / Aquatic bioproduction science

  • Life Science / Animal physiological chemistry, physiology and behavioral biology

  • Life Science / Evolutionary biology

Education

  • Kyoto University   Graduate School of Science   Division of Biological Sciences

    2018.4 - 2021.3

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  • Kyoto University   Graduate School of Science   Division of Biological Sciences

    2016.4 - 2018.3

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  • Kyoto University   Faculty of Agriculture   Faculty of Agriculture

    2012.4 - 2016.3

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Research History

  • Ehime University   Graduate School of Science and Engineering

    2024.4

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  • National Fisheries University

    2022.4 - 2024.3

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  • Kyushu University   Faculty of Agriculture   Assistant Professor

    2021.12 - 2022.3

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  • Kyushu University   Faculty of Agriculture   Postdoctoral Fellow   Assistant Professor

    2021.5 - 2021.11

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Professional Memberships

Committee Memberships

  • 愛媛県   野生動植物保護推進員  

    2024.9   

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    Committee type:Municipal

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Papers

  • A key evolutionary step determining osmoregulatory ability for freshwater colonisation in early life stage of fish Reviewed

    Yumeki Oto, Mari Kuroki, Midori Iida, Ryosuke Ito, Shota Nomura, Katsutoshi Watanabe

    Journal of Experimental Biology   2023.9

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    Authorship:Lead author, Corresponding author   Publishing type:Research paper (scientific journal)   Publisher:The Company of Biologists  

    Colonisation of freshwater habitats by marine animals is a remarkable evolutionary event that has enriched biodiversity in freshwater ecosystems. The acquisition of the tolerance to hypotonic stress during the early life stages is presumed to be essential for their successful freshwater colonisation, but very little empirical evidence has been obtained to support this idea. This study aimed to comprehend the evolutionary changes of osmoregulatory mechanisms that enhance the larval freshwater tolerance in amphidromous fishes, which typically spend their larval period in marine (ancestral) habitats and the rest of life history stages in freshwater (derived) habitats. We compared the life history patterns and changes in larval survivorship and gene expression depending on salinity among three congeneric marine-originated amphidromous goby species (Gymnogobius), which had been suggested to differ in their larval dependence on freshwater habitats. An otolith microchemical analysis and laboratory-rearing experiment confirmed the presence of freshwater residents only in G. urotaenia and higher larval survivorship of this species in the freshwater condition than the obligate amphidromous G. petschiliensis and G. opperiens. Larval whole-body transcriptome analysis revealed that G. urotaenia from both amphidromous and freshwater-resident populations exhibited the greatest differences in expression levels of several osmoregulatory genes, including aqp3, which is critical for water discharge from their body during early fish development. The present results consistently support the importance of enhanced freshwater tolerance and osmoregulatory plasticity in larval fish to establish freshwater forms, and further identified key candidate genes for larval freshwater adaptation and colonisation in the goby group.

    DOI: 10.1242/jeb.246110

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  • Does larval ability to modulate body buoyancy explain successful colonization of freshwater environments by diadromous gobies?

    Yumeki Oto, Katsutoshi Watanabe

    2023.7

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    Authorship:Lead author, Corresponding author  

    DOI: 10.1101/2023.07.27.550194

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  • Suggestions for overwintering of the Yellowfin Goby in a fresh- water spring in Maizuru City, Kyoto Prefecture, Japan. Reviewed

    Oto Yumeki

    Ichthy, Natural History of Fishes of Japan   34   23 - 27   2023.7

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    Authorship:Lead author, Corresponding author   Language:Japanese   Publishing type:Research paper (scientific journal)  

    DOI: 10.34583/ichthy.34.0_23

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  • Artificial Shelters that Promote Settlement and Improve Nutritional Condition of Japanese Eels in a Human-Modified Estuary Reviewed

    Yumeki Oto, Rei Sakanoue, Kazuki Matsushige, Yusuke Hibino, Noritaka Mochioka

    Estuaries and Coasts   46 ( 2 )   551 - 561   2023.3

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Springer Science and Business Media {LLC}  

    DOI: 10.1007/s12237-022-01152-z

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  • A key evolution in gene expression plasticity for freshwater colonisation in early life stage of fish

    Yumeki Oto, Mari Kuroki, Midori Iida, Ryosuke Ito, Shota Nomura, Katsutoshi Watanabe

    2022.7

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    Authorship:Lead author, Corresponding author   Publishing type:Research paper (scientific journal)   Publisher:Authorea, Inc.  

    <p id="p1">Colonisation of freshwater habitats by marine animals is a remarkableevolutionary event that has enriched biodiversity in freshwaterecosystems. For successful freshwater colonisation, high physiologicalplasticity is presumed to be necessary, but its evolutionary basis hasnot been detailed. Marine-originated amphidromous species, whichregularly migrate between freshwater and marine environments, haverepeatedly lost migratory behaviour in many lineages, which sometimestriggered species radiation in freshwater habitats. Since amphidromousspecies typically visit the sea during the larval period, the difficultyin the evolution of larval freshwater tolerance is a bottleneck forfreshwater colonisation. To elucidate the key evolutionary changes thatenhance the physiological plasticity for freshwater colonisation, wecompared larval gene expression changes depending on salinity conditionsamong three congeneric amphidromous goby species (Gymnogobius) withvarying dependences on freshwater habitats. First, an otolithmicrochemical analysis and rearing experiment under laboratoryconditions confirmed the presence of freshwater residents only in G.urotaenia and higher larval survivorship of this species both inseawater and freshwater conditions than the obligate amphidromous G.petschiliensis and G. opperiens. Larval whole-body transcriptomeanalysis revealed that G. urotaenia exhibited the greatest differencesin the expression levels of several osmoregulatory genes, includingaqp3, which is critical for water discharge from their body during earlyfish development. Thus, we obtained the results that consistentlysupport the importance of enhanced osmoregulatory plasticity forestablishing freshwater forms, and further identified some importantevolutionary changes for larval freshwater adaptation and colonisationin the goby group.</p>

    DOI: 10.22541/au.165777854.44197862/v1

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  • Distribution of adult fish and spawning nests of estuarine-dependent amphidromous goby (Gymnogobius petschiliensis) in two streams of central Japan Reviewed

    Yumeki Oto

    MARINE AND FRESHWATER RESEARCH   73 ( 1 )   81 - 91   2022

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:CSIRO PUBLISHING  

    Adults of the marine-originated amphidromous goby (Gymnogobius petschiliensis) inhabit both freshwater and brackish-water areas, unlike many other amphidromous species, which spend their entire lives, except the larval stage, in freshwater. Furthermore, adult G. petschiliensis individuals incur higher osmoregulatory costs in freshwater than those in hypertonic brackish water under laboratory conditions, suggesting that the ecology of the species is largely dependent on high-salinity (ancestral) environments. Therefore, a detailed information on the ecology of G. petschiliensis will help elucidate the diversity and evolution of amphidromy. Here, this study assessed the habitat use and freshwater dependency of G. petschiliensis in two streams in central Japan. Year-round surveys showed that adult density was higher in freshwater than in brackish water during the non-spawning season. This implies that adults chose salinity habitats according to ecological conditions (e.g. inter- and intraspecific competition, and predation risk) without being bound by physiological preferences. Conversely, most egg clutches were found in brackish water. Furthermore, adult density in brackish water increased with the increase in spawning events, suggesting that the adults migrated downstream for spawning. This preference for spawning in brackish water rather than in freshwater may be attributed to the constraints of their reproductive physiology.

    DOI: 10.1071/MF21181

    Web of Science

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  • Preferred gap structure within stone piles of fishing gear by Japanese eel Anguilla japonica at each life history stage: the search for an effective method to restore estuarine habitats Reviewed

    YUMEKI OTO, REI SAKANOUE, YUSUKE HIBINO, KAZUKI MATSUSHIGE, KAZUO UTIDA, NORITAKA MOCHIOKA

    NIPPON SUISAN GAKKAISHI   88 ( 3 )   152 - 161   2022

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    Authorship:Lead author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:Japanese Society of Fisheries Science  

    To conserve the Japanese eel Anguilla japonica, damaged estuarine habitats need to be restored, because the estuaries are essential for not only growth of the species, but also as areas for silver eels to acclimate to seawater prior to migrating into the ocean for spawning. As a first step towards improving and restoring estuarine habitats, this study aimed to reveal the preferred gap structure within stone piles by eels at each life history stage. Compari-son of the number of individuals among Ishikura nets with different-sized stones (large, 30 cm in major axis; medi-um, 20 cm; small, 10 cm) found that the immature adults (elvers and yellow eels) preferred those with small-sized stones the most. In contrast, the maturing adults in the middle of downstream spawning migration (silver eels) uti-lized only the Ishikura nets with large and medium-sized stones. These findings suggest the importance of estab-lishing estuarine habitats with various-sized stones to allow many eels to survive to maturity in stream areas.

    DOI: 10.2331/suisan.21-00043

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  • Preference for saline water of an amphidromous goby maintained during migration to upstream freshwater areas Reviewed

    Yumeki Oto

    JOURNAL OF FISH BIOLOGY   97 ( 1 )   202 - 211   2020.7

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:WILEY  

    This study aimed to reveal the salinity preference of juveniles of an amphidromous goby, Sumi-ukigori Gymnogobius petschiliensis, while migrating to a freshwater area. Salinity choice experiments revealed that juveniles of this species significantly prefer brackish water (salinity 20) to freshwater (salinity 0) when acclimated to a salinity of 20 in advance. Additional experiments revealed no preference between brackish water and seawater (salinity 35). Since body size was not correlated with the strength of preference for brackish water, and adults of this species are also known to prefer brackish water at a salinity of 20 to freshwater, the preference for saline water may be consistent after migration to a freshwater area. Considering that juvenile G. petschiliensis would often migrate to freshwater areas just after entering streams, the migration should be against its salinity preference. This directly contrasts with other diadromous species, which prefer the salinity of destination areas during and after migration. Adult and juvenile G. petschiliensis may take advantage of high euryhalinity to choose habitats where such ecological costs, such as high predation risk and interspecific competition, are low (i.e., freshwater areas).

    DOI: 10.1111/jfb.14351

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  • Size-dependent habitat use in the stream goby Rhinogobius flumineus is affected by a larger sympatric congener Reviewed

    Yumeki Oto, Reiji Masuda

    ICHTHYOLOGICAL RESEARCH   66 ( 3 )   393 - 399   2019.7

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:SPRINGER JAPAN KK  

    The study of changes in intraspecific habitat use when closely related species coexist aids our understanding of the relationships between intra- and interspecific interactions in fishes. However, evidence of this phenomenon is few and shown in a very limited number of taxa. In particular, the stream goby [Rhinogobius flumineus (Mizuno, 1960)] is known for intraspecific variation in habitat use. We used underwater visual surveys to investigate this species' size-dependent habitat use, both in isolation and in the presence of a sympatric congener, Rhinogobius nagoyae Jordan & Seale, 1906. A generalized linear mixed model and multiple comparison tests revealed that in the absence of R. nagoyae, R. flumineus body length was positively correlated with river flow velocity. This correlation disappeared when R. flumineus coexisted with R. nagoyae. Additionally, R. nagoyae density increased with flow velocity. Observations of interspecific territorial behavior revealed that larger individuals dominated in male-male competition regardless of species combination. Of the two species, R. nagoyae is significantly larger, so it was likely to exclude even relatively big R. flumineus individuals from fast riffles, the habitat preferred by both species. This study demonstrated that interspecific competition dominates intraspecific competition under sympatric conditions with larger related species.

    DOI: 10.1007/s10228-019-00684-y

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  • Upstream migration without complete osmoregulatory switching in an amphidromous goby: Estimated by body condition changes in different salinity environment Reviewed

    Yumeki Oto

    JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY   514   67 - 75   2019.5

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:ELSEVIER  

    The floating goby Gymnogobius petschiliensis Rendahl is an amphidromous fish, which migrates upstream from the sea in the juvenile period and then inhabits not only freshwater areas but also brackish water. Most of the species that have such migratory polymorphism switch their osmoregulatory mechanism in synchrony with the timing of migration, but in G. petschiliensis it is known that even individuals living in freshwater areas behaviourally prefer brackish water to freshwater conditions in a laboratory. To clarify whether this species lives in freshwater areas with high osmoregulatory cost, the relationship between physiological cost and salinity was investigated using adult fish of the species captured in a freshwater area. Adults were kept individually in 13 L tanks with various salinity levels under fasted conditions. Their loss of body weight in freshwater conditions was more rapid than in 2/3 seawater, whereas the frequencies of horizontal and vertical movement in 13 L tanks did not differ significantly between freshwater and 2/3 seawater conditions. This suggests that the weight loss reflects not behavioural performance but physiological cost. In addition, no adults died even when transferred from freshwater to seawater conditions, indicating that they have high tolerance to salinity change in estuarine areas even after migrating to freshwater areas. These results support the hypothesis that G. petschiliensis migrates to freshwater areas while maintaining high hypo-osmoregulatory ability and paying a high physiological cost. Because G. petschiliensis phylogenetically originates from the coastal species, this example of migration without completely switching the osmoregulatory mechanism may help us to understand the diverse processes of up-stream migration in marine fish.

    DOI: 10.1016/j.jembe.2019.03.014

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  • Inconsistency between salinity preference and habitat salinity in euryhaline gobiid fishes in the Isazu River, northern Kyoto Prefecture Reviewed

    Yumeki Oto, Masahiro Nakamura, Hiroaki Murakami, Reiji Masuda

    JOURNAL OF ETHOLOGY   35 ( 2 )   203 - 211   2017.5

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    Authorship:Lead author, Corresponding author   Language:English   Publishing type:Research paper (scientific journal)   Publisher:SPRINGER JAPAN KK  

    Adults of three amphidromous gobiid fishes, Tridentiger brevispinis, Rhinogobius similis, and Gymnogobius petschiliensis, are euryhaline and generally found in both freshwater (FW) and brackish water (BW) areas. The determining factors for their choice of habitat with different salinity have never been explored. In this study, a salinity-choice experiment was conducted using the above species captured in the FW region of the Isazu River, northern Kyoto Prefecture. For comparison, the fluvial goby Rhinogobius flumineus and BW-acclimated G. petschiliensis were also tested. We found that the three euryhaline species, including BW-acclimated G. petschiliensis, preferred BW to FW, whereas R. flumineus preferred FW. These results suggest that salinity preference did not determine habitat in these euryhaline gobiids, which were found in FW. Surveys were also conducted focusing on competitors and predators in their potential habitats. Thus, net sampling captured many other gobiid species, and an environmental DNA method detected Japanese temperate bass, a voracious predator, in the estuarine areas, suggesting that biotic factors are major determinants in the distribution of euryhaline species.

    DOI: 10.1007/s10164-017-0510-3

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MISC

  • ニホンウナギ保全に向けた石倉増殖礁の設置適地:32水系49地点におけるモニタリング結果を用いた探索

    松重一輝, 大戸夢木, 坂上嶺, 日比野友亮, 酒井恭平, 内田和男, 望岡典隆

    日本水産学会大会講演要旨集(CD-ROM)   2024   2024

  • ニホンウナギの好きな浮石間隙構造は?:すみかのなくなった汽水域のオアシスを造る Invited

    大戸夢木, 坂上 嶺, 日比野友亮, 松重一輝, 内田和男, 望岡典隆

    東アジア鰻学会ニュースレター   ( 21 )   1 - 2   2022

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    Authorship:Lead author   Language:Japanese   Publishing type:Article, review, commentary, editorial, etc. (other)  

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  • 石倉カゴの効果検証 9:ニホンウナギの浮石間構造への選好性

    大戸夢木, 坂上嶺, 日比野友亮, 松重一輝, 内田和男, 望岡典隆

    日本水産学会大会講演要旨集(CD-ROM)   2022   2022

  • 石倉カゴの効果検証 10:汽水域におけるニホンウナギの定着と栄養状態の改善を促す間隙構造

    大戸夢木, 坂上嶺, 松重一輝, 日比野友亮, 望岡典隆

    日本水産学会大会講演要旨集(CD-ROM)   2022   2022

Presentations

  • Growth and maturation strategies in relation to growth habitat quality: elucidation of ecological consequences of riverine environmental degradation Invited

    2024.9 

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  • ニホンウナギ保全に向けた石倉増殖礁の設置適地:32水系49地点におけるモニタリング結果を用いた探索

    松重一輝, 大戸夢木, 坂上 嶺, 日比野友亮, 酒井恭平, 内田和男, 望岡典隆

    令和6年度日本水産学会春季大会  2024.3 

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  • ハゼ科両側回遊種の陸封化の鍵を握る仔魚期の生理特性

    大戸夢木, 渡辺勝敏

    2019年度日本魚類学会年会  2019.9 

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  • 汽水魚はなぜ淡水域に入るのか?:生息地の塩分と生理コストの不一致

    大戸夢木

    第64回日本生態学会大会  2017.3 

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    Language:Japanese   Presentation type:Poster presentation  

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  • ニホンウナギが好む浮石の間隙

    大戸夢木, 坂上嶺, 日比野友亮, 松重一輝, 内田和男, 望岡典隆

    東アジア鰻学会第5回研究発表会  2022.3 

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  • 石倉カゴの効果検証9: ニホンウナギの浮石間隙構造への選好性

    大戸夢木, 坂上嶺, 日比野友亮, 松重一輝, 内田和男, 望岡典隆

    令和4年度日本水産学会春季大会  2022.3 

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  • 石倉カゴの効果検証10: 汽水域におけるニホンウナギの定着と栄養状態の改善を促す間隙構造

    大戸夢木, 坂上嶺, 松重一輝, 日比野友亮, 望岡典隆

    令和4年度日本水産学会春季大会  2022.3 

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  • Stream habitat utilization of freshwater goby Rhinogobius flumineus in relation to intra- and interspecific competitions and environmental factors

    Yumeki Oto, Reiji Masuda, Masahiro Nakamura, Hiroaki Murakami

    The 7th East Asian Federation of Ecological Societies International Congress  2016.4 

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  • 日本海側河川の両側回遊性ハゼ科魚類における塩分環境利用パターンとこれに関わる環境要因

    大戸夢木, 中村政裕, 村上弘章, 益田玲爾

    平成28年度日本水産学会春季大会  2016.3 

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  • 生理特性から探る広塩性スミウキゴリの塩分環境利用を規定する要因

    大戸夢木

    日本生態学会近畿地区会2016年度第1回例会  2016.12 

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  • ハゼ科スミウキゴリにおける遡河稚魚の塩分選好性

    大戸夢木

    日本動物行動学会第35回大会  2016.11 

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Awards

  • 平成31年度特に優れた研究業績による奨学金返還免除(全額免除)

    2018.5   日本学生支援機構  

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  • Best Poster Award

    2016.4   East Asian Federation of Ecological Societies   Stream habitat utilization of freshwater goby Rhinogobius flumineus in relation to intra- and interspecific competitions and environmental factors

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Research Projects

  • 汽水域環境が回遊行動の変化を介して魚類の生涯繁殖成功度に与える影響

    2024.10 - 2025.3

    国立大学法人 愛媛大学  令和6年度愛媛大学研究活性化事業(若手研究活動スタート支援) 

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    Authorship:Principal investigator 

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  • 大回遊に挑むニホンウナギ産卵親魚の栄養状態を高める河川環境要因

    2023.4 - 2026.3

    日本学術振興会  科学研究費助成事業 若手研究  若手研究

    大戸 夢木

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    Grant amount:\4550000 ( Direct Cost: \3500000 、 Indirect Cost:\1050000 )

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  • 汽水域は通し回遊魚の単なる通過点か?: 繁殖場所としての機能の定量

    2022.8 - 2024.3

    日本学術振興会  科学研究費助成事業 研究活動スタート支援  研究活動スタート支援

    大戸 夢木

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    Grant amount:\2860000 ( Direct Cost: \2200000 、 Indirect Cost:\660000 )

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  • ハゼ科魚類における純淡水性獲得時の鍵形質と生活史形質の進化

    2018.4 - 2021.3

    日本学術振興会  科学研究費助成事業 特別研究員奨励費  特別研究員奨励費

    大戸 夢木

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    Grant amount:\2800000 ( Direct Cost: \2800000 )

    魚類において繰り返されてきた海から淡水域への進出は, 種や生活史の多様化を引き起こしてきた. 海と川を行き来する通し回遊性は, 海水性と淡水性の中間型として淡水進出の途上でしばしば出現するとされ, この生活史や生理特性の解明は淡水進出プロセスへの理解を深める上で重要である.
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    海を起源とするハゼ科ウキゴリ属は, 8種の海水・汽水種に加え, 少なくともそれぞれ3種の通し回遊種と淡水種を含み, 海水魚から通し回遊魚, さらには淡水魚に至るまでの生活史進化プロセスを研究する上で好適な分類群である. 互いに近縁な通し回遊種であるウキゴリ, シマウキゴリ, スミウキゴリは, 基本的に淡水域で孵化した直後に海へ降り, 稚魚期に川へ戻る両側回遊型である. 一方, これら3種のうちウキゴリのみに, 一生を淡水域で過ごす陸封集団が多数認められる. また, 淡水湖である琵琶湖には, ウキゴリの最近縁種で淡水性のイサザが生息し, 両種の共通祖先の陸封が淡水性の進化のきっかけとなったことが示唆されている. このように, 陸封は淡水性が派生する上での重要な生態学的機会となりうるため, 陸封を可能にする生理形質の獲得は進化的に重要なイベントであるといえる. しかし, 陸封に際してどのような生理機能を獲得する必要があるかはほとんど分かっていない.
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    本研究では, ウキゴリ属において通し回遊種の陸封化には仔魚の淡水順応能力が鍵を握ると予測し, この検証を行なっている. まず, 陸封化が起こるウキゴリと, 陸封集団の認められないシマウキゴリ, スミウキゴリの間で仔魚の淡水順応能力を比較する生理実験を行なった. さらに, RNA-Seq解析により, この能力の違いをもたらす生理基盤の特定を行った. また, 耳石に蓄積された元素を分析することで, 上記実験に用いた各種の集団の回遊パターンを明らかにした.

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Teaching Experience

  • Experiment in Biology Ⅰ

    2024.4 Institution:Ehime University

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  • Basic Experiments in Biology

    2024.4 Institution:Ehime University

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  • Perspectives for Modern Biology Ⅰ

    2024.4 Institution:Ehime University

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  • Aquatic Bioenvironmental Science

    2024.4 Institution:Ehime University

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  • 生物学基礎実験

    2022.10 - 2024.3 Institution:水産大学校

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  • 藻場・干潟保全生態学

    2022.10 - 2024.3 Institution:水産大学校

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  • 増殖生態学

    2022.10 - 2024.3 Institution:水産大学校

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  • Practical Work of Basic Aquaculture

    2022.4 - 2024.3 Institution:National Fisheries University

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  • 沿岸生態系保全実習

    2022.4 - 2024.3 Institution:水産大学校

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  • Applied Biology

    2022.4 - 2024.3 Institution:National Fisheries University

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Academic Activities

  • 2024年度日本魚類学会年会 優秀発表賞選考委員(ポスター)

    Role(s): Review, evaluation

    2024.9

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    Type:Academic society, research group, etc. 

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  • 日本生態学会第70回大会 英語口頭発表賞審査員

    Role(s): Review, evaluation

    2023.3

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    Type:Academic society, research group, etc. 

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